Publications
The following is a collection of publications that have made use of the GSCID data. If your publication uses this data and isn't listed below, contact us.
Das SR, Hensley SE, et al.
Defining Influenza a Virus Hemagglutinin Antigenic Drift by Sequential Monoclonal Antibody Selection.
Cell Host & Microbe. 2013 Mar 13; 13: 314-23.[more]
Abernathy E, Chen MH, et al.
Analysis of Whole Genome Sequences of 16 Strains of Rubella Virus from the United States, 1961--2009.
Virology Journal. 2013 Jan 25; 10: 32.[more]
Joardar V, Abrams NF, et al.
Sequencing of Mitochondrial Genomes of Nine Aspergillus and Penicillium Species Identifies Mobile Introns and Accessory Genes as Main Sources of Genome Size Variability.
BMC genomics. 2012 Dec 12; 13: 698.[more]
Gilchrist CA, Ali IK, et al.
A Multilocus Sequence Typing System (MLST) Reveals a High Level of Diversity and a Genetic Component to Entamoeba histolytica Virulence.
BMC microbiology. 2012 Dec 01; 12: 151.[more]
Krampis K, Booth T, et al.
Cloud BioLinux: Pre-configured and On-demand Bioinformatics Computing for the Genomics Community.
BMC bioinformatics. 2012 Dec 01; 13: 42.[more]
Nelson MI, Detmer SE, et al.
Genomic Reassortment of Influenza A Virus In North American Swine, 1998-2011.
The Journal of General Virology. 2012 Dec 01; 93: 2584-9.[more]
Varga JJ, Losada L, et al.
Draft Genome Sequence Determination for Cystic Fibrosis and Chronic Granulomatous Disease Burkholderia multivorans Isolates.
Journal of bacteriology. 2012 Nov 01; 194: 6356-7.[more]
Dominguez SR, Sims GE, et al.
Genomic Analysis of 16 Colorado Human NL63 Coronaviruses Identifies a New Genotype, High Sequence Diversity In the N-terminal Domain of the Spike Gene and Evidence of Recombination.
The Journal of general virology. 2012 Nov 01; 93: 2387-98.[more]
Faix DJ, Hawksworth AW, et al.
Decreased Serologic Response In Vaccinated Military Recruits During 2011 Correspond to Genetic Drift In Concurrent Circulating Pandemic A/H1N1 Viruses.
PloS one. 2012 Sep 01; 7: e34581.[more]
Fouts DE, Brinkac L, et al.
PanOCT: Automated Clustering of Orthologs Using Conserved Gene Neighborhood for Pan-genomic Analysis of Bacterial Strains and Closely Related Species.
Nucleic acids research. 2012 Aug 16;[more]
Chang HW, Egberink HF, et al.
Spike Protein Fusion Peptide and Feline Coronavirus Virulence.
Emerging infectious diseases. 2012 Jul 01; 18: 1089-95.[more]
Wang S, Sundaram JP, et al.
VIGOR Extended to Annotate Genomes for Additional 12 Different Viruses.
Nucleic acids research. 2012 Jul 01; 40: W186-92.[more]
Vivien G Dugan, Kazima Saira, et al.
Large-scale Sequencing and the Natural History of Model Human RNA Viruses
2012 Jun 01; 0: 563-573.[more]
Ricaldi JN, Fouts DE, et al.
Whole Genome Analysis of Leptospira Licerasiae Provides Insight Into Leptospiral Evolution and Pathogenicity.
PLoS Neglected Tropical Diseases. 2012 Mar 01; 6: e1853.[more]
Gillespie, J. J., Joardar, V., et al.
A Rickettsia Genome Overrun by Mobile Genetic Elements Provides Insight Into the Acquisition of Genes Characteristic of an Obligate Intracellular Lifestyle.
Journal of bacteriology. 2012 Jan 01; 194(2): 376-94.[more]
Klaassen, C. H., Gibbons, J. G., et al.
Evidence for Genetic Differentiation and Variable Recombination Rates Among Dutch Populations of the Opportunistic Human Pathogen Aspergillus Fumigatus.
Molecular ecology. 2012 Jan 01; 21(1): 57-70.[more]
Lam, T. T., Ip, H. S., et al.
Migratory Flyway and Geographical Distance Are Barriers to the Gene Flow of Influenza Virus Among North American Birds.
Ecology letters. 2012 Jan 01; 15(1): 24-33.[more]
Ping J, Keleta K, et al.
Genomic and protein structural maps of adaptive evolution of human influenza A virus to increased virulence in the mouse.
PloS one. 2011 Dec 01; 6: e21740.[more]
Bahl J, Nelson MI, et al.
Temporally Structured Metapopulation Dynamics and Persistence of Influenza A H3N2 Virus In Humans.
Proceedings of the National Academy of Sciences of the United States of America. 2011 Nov 29; 108: 19359-64.[more]
Myers, C. A., Kasper, M. R., et al.
Dual Infection of Novel Influenza Viruses A/H1N1 and A/H3N2 In a Cluster of Cambodian Patients.
The American journal of tropical medicine and hygiene. 2011 Nov 01; 85(5): 961-3.[more]
McDonald SM, Davis K, et al.
Intra-genotypic Diversity of Archival G4P[8] Human Rotaviruses from Washington, DC.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 2011 Oct 01; 11: 1586-94.[more]
Xiao, L., Paralanov, V., et al.
Extensive Horizontal Gene Transfer In Ureaplasmas from Humans Questions the Utility of Serotyping for Diagnostic Purposes.
Journal of clinical microbiology. 2011 Aug 01; 49(8): 2818-26.[more]
Dwyer, D. E., Dwyer DE
Surveillance of Illness Associated With Pandemic (H1N1) 2009 Virus Infection Among Adults Using a Global Clinical Site Network Approach: the INSIGHT FLU 002 and FLU 003 Studies.
Vaccine. 2011 Jul 22; 29: B56-62.[more]
Holmes, E. C., Ghedin, E., et al.
Extensive Geographical Mixing of 2009 Human H1N1 Influenza A Virus In a Single University Community.
Journal of virology. 2011 Jul 01; 85(14): 6923-9.[more]
Vlasova, A. N., Halpin, R., et al.
Molecular Characterization of a New Species In the Genus Alphacoronavirus Associated With Mink Epizootic Catarrhal Gastroenteritis.
The Journal of general virology. 2011 Jun 01; 92(0): 1369-79.[more]
Losada, L., Varga, J. J., et al.
Genome Sequencing and Analysis of Yersina pestis KIM D27, an Avirulent Strain Exempt from Select Agent Regulation.
PloS one. 2011 Mar 01; 6(4): e19054.[more]
Ghedin, E., Laplante, J., et al.
Deep Sequencing Reveals Mixed Infection With 2009 Pandemic Influenza A (H1N1) Virus Strains and the Emergence of Oseltamivir Resistance.
The Journal of infectious diseases. 2011 Jan 15; 203(2): 168-74.[more]
Nelson, M. I., Tan, Y., et al.
Phylogeography of the Spring and Fall Waves of the H1N1/09 Pandemic Influenza Virus In the United States
J Virol. 2011 Jan 01; 85(2): 828-34.[more]
Roy, P. H., Tetu, S. G., et al.
Complete Genome Sequence of the Multiresistant Taxonomic Outlier Pseudomonas aeruginosa PA7
PLoS One. 2010 Nov 02; 5(1): e8842.[more]
Donati, C., Hiller, N. L., et al.
Structure and Dynamics of the Pan-genome of Streptococcus pneumoniae and Closely Related Species
Genome Biol. 2010 Oct 29; 11(10): R107.[more]
Zhou, B., Li, Y., et al.
PB2 Residue 158 Is a Pathogenic Determinant of Pandemic-H1N1 and H5 Influenza A Viruses In Mice
J Virol. 2010 Oct 20;[more]
Arensburger, P., Megy, K., et al.
Sequencing of Culex Quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics
Science. 2010 Oct 01; 330(6000): 86-8.[more]
Chan, A. P., Crabtree, J., et al.
Draft Genome Sequence of the Oilseed Species Ricinus communis
Nat Biotechnol. 2010 Aug 22; 28(9): 951-6.[more]
Xiao, L., Glass, J. I., et al.
Detection and Characterization of Human Ureaplasma Species and Serovars by Real-time PCR
Journal of clinical microbiology. 2010 Aug 01; 48(8): 2715-23.[more]
Bulach, D., Halpin, R., et al.
Molecular Analysis of H7 Avian Influenza Viruses from Australia and New Zealand: Genetic Diversity and Relationships - 1976 to 2007
J Virol. 2010 Jul 28; 84(19): 9957-66.[more]
Khaldi, N., Seifuddin, F. T., et al.
SMURF: Genomic Mapping of Fungal Secondary Metabolite Clusters
Fungal Genet Biol. 2010 Jun 05; 47(9): 736-41.[more]
Lorenzi, H. A., Puiu, D., et al.
New Assembly, Reannotation and Analysis of the Entamoeba histolytica Genome Reveal New Genomic Features and Protein Content Information
PLoS Negl Trop Dis. 2010 Jun 01; 4(6): e716.[more]
Song, H., Hwang, J., et al.
The Early Stage of Bacterial Genome-reductive Evolution In the Host
PLoS Pathog. 2010 Jun 01; 6(5): e1000922.[more]
Ghedin, E., Wentworth, D. E., et al.
Unseasonal Transmission of H3N2 Influenza A Virus During the Swine-origin H1N1 Pandemic.
Journal of virology. 2010 Jun 01; 84(11): 5715-8.[more]
Nelson, K. E., Weinstock, G. M., et al.
A Catalog of Reference Genomes from the Human Microbiome
Science. 2010 May 21; 328(5981): 994-9.[more]
Eckerle, L. D., Becker, M. M., et al.
Infidelity of SARS-CoV Nsp14-exonuclease Mutant Virus Replication Is Revealed by Complete Genome Sequencing
PLoS Pathog. 2010 May 06; 6(5): e1000896.[more]
Nandi, T., Ong, C., et al.
A Genomic Survey of Positive Selection In Burkholderia pseudomallei Provides Insights Into the Evolution of Accidental Virulence
PLoS Pathog. 2010 Feb 15; 6(4): e1000845.[more]
Wozniak, R. A., Fouts, D. E., et al.
Comparative ICE Genomics: Insights Into the Evolution of the SXT/R391 Family of ICEs
PLoS Genet. 2009 Dec 01; 5(12): e1000786.[more]
Eppinger, M., Guo, Z., et al.
Draft Genome Sequences of Yersinia pestis Isolates from Natural Foci of Endemic Plague In China
J Bacteriol. 2009 Dec 01; 191(24): 7628-9.[more]
Nelson, M., Spiro, D., et al.
The Early Diversification of Influenza A/H1N1pdm
PLoS Curr Influenza. 2009 Dec 01;: RRN1126.[more]
McDonald, S. M., Matthijnssens, J., et al.
Evolutionary Dynamics of Human Rotaviruses: Balancing Reassortment With Preferred Genome Constellations
PLoS Pathog. 2009 Oct 01; 5(10): e1000634.[more]
Wywial, E., Haven, J., et al.
Fast, Adaptive Evolution at a Bacterial Host-resistance Locus: the PFam54 Gene Array In Borrelia burgdorferi
Gene. 2009 Sep 15; 445(1): 26-37.[more]
Fricke, W. F., McDermott, P. F., et al.
Antimicrobial Resistance-conferring Plasmids With Similarity to Virulence Plasmids from Avian Pathogenic Escherichia coli Strains In Salmonella enterica Serovar Kentucky Isolates from Poultry
Appl Environ Microbiol. 2009 Sep 01; 75(18): 5963-71.[more]
Fricke, W. F., Welch, T. J., et al.
Comparative Genomics of the IncA/C Multidrug Resistance Plasmid Family
J Bacteriol. 2009 Aug 01; 191(15): 4750-7.[more]
Lefébure T, Stanhope MJ
Pervasive, Genome-wide Positive Selection Leading to Functional Divergence In the Bacterial Genus Campylobacter.
Genome research. 2009 Jul 01; 19: 1224-32.[more]
Ghedin, E., Fitch, A., et al.
Mixed Infection and the Genesis of Influenza Diversity
J Virol. 2009 Jun 24;[more]
Nelson, M. I., Simonsen, L., et al.
The Origin and Global Emergence of Adamantane Resistant A/H3N2 Influenza Viruses
Virology. 2009 Jun 05; 388(2): 270-8.[more]
Fedorova, N. D., Harris, S., et al.
Using ACGH to Study Intraspecific Genetic Variability In Two Pathogenic Molds, Aspergillus fumigatus and Aspergillus flavus
Med Mycol. 2009 Mar 17;: 1-8.[more]
Beare, P. A., Unsworth, N., et al.
Comparative Genomics Reveal Extensive Transposon-mediated Genomic Plasticity and Diversity Among Potential Effector Proteins Within the Genus Coxiella
Infect Immun. 2009 Feb 01; 77(2): 642-56.[more]
Song, H., Hwang, J., et al.
Simple Sequence Repeat (SSR)-based Gene Diversity In Burkholderia pseudomallei and Burkholderia mallei
Mol Cells. 2009 Feb 01; 27(2): 237-41.[more]
Djikeng, A., Spiro, D.
Advancing Full Length Genome Sequencing for Human RNA Viral Pathogens
Future Virol. 2009 Jan 01; 4(1): 47-53.[more]
Mabey Gilsenan, J. E., Atherton, G., et al.
Aspergillus Genomes and the Aspergillus Cloud
Nucleic Acids Res. 2009 Jan 01; 37(0): D509-14.[more]
Lorenzi, H., Thiagarajan, M., et al.
Genome Wide Survey, Discovery and Evolution of Repetitive Elements In Three Entamoeba Species
BMC Genomics. 2008 Dec 10; 9(1): 595.[more]
Carlton, J. M., Adams, J. H., et al.
Comparative Genomics of the Neglected Human Malaria Parasite Plasmodium vivax
Nature. 2008 Oct 09; 455(7214): 757-63.[more]
Alekseev, K. P., Vlasova, A. N., et al.
Bovine-Like Coronaviruses Isolated From Four Species Of Captive Wild Ruminants Are Homologous To Bovine Coronaviruses Based On Complete Genomic Sequences
J Virol. 2008 Oct 08; 82(24): 12422-31.[more]
McDonagh, A., Fedorova, N. D., et al.
Sub-telomere Directed Gene Expression During Initiation of Invasive Aspergillosis
PLoS Pathog. 2008 Sep 01; 4(9): e1000154.[more]
Nelson, M. I., Edelman, L., et al.
Molecular Epidemiology of A/H3N2 and A/H1N1 Influenza Virus During a Single epidemic Season In the United States
PLoS Pathog. 2008 Aug 01; 4(8): e1000133.[more]
Rasko, D. A., Rosovitz, M. J., et al.
The Pan-genome Structure of Escherichia Coli: Comparative Genomic Analysis of E. coli Commensal and Pathogenic Isolates
J Bacteriol. 2008 Aug 01; 190(20): 6881-93.[more]
Margos, G., Gatewood, A. G., et al.
MLST of Housekeeping Genes Captures Geographic Population Structure and Suggests a European Origin of Borrelia burgdorferi
Proc Natl Acad Sci U S A. 2008 Jun 24; 105(25): 8730-5.[more]
Dugan, V.G., Chen, R., et al.
The Evolutionary Genetics and Emergence of Avian Influenza Viruses In Wild Birds
PLoS Pathog. 2008 May 30; 4(5): e1000076.[more]
Rambaut, A., Pybus, O. G., et al.
The Genomic and Epidemiological Dynamics of Human Influenza A Virus
Nature. 2008 May 29; 453(7195): 615-9.[more]
Boni, M. F., Zhou, Y., et al.
Homologous Recombination Is Very Rare or Absent In Human Influenza A Virus
J Virol. 2008 May 01; 82(10): 4807-11.[more]
Schutzer, S. E., Schlater, L. R., et al.
Characterization of Clinically-Attenuated Burkholderia mallei by Whole Genome Sequencing: Candidate Strain for Exclusion from Select Agent Lists
PLoS ONE. 2008 Apr 30; 3(4): e2058.[more]
Tumapa, S., Holden, M. T., et al.
Burkholderia pseudomallei Genome Plasticity Associated With Genomic Island Variation
BMC Genomics. 2008 Apr 25; 9(1): 190.[more]
Fedorova, N. D., Khaldi, N., et al.
Genomic Islands In the Pathogenic Filamentous Fungus Aspergillus fumigatus
PLoS Genet. 2008 Apr 01; 4(4): e1000046.[more]
Kraiczy, P., Seling, A., et al.
Borrelia burgdorferi Complement Regulator-acquiring Surface Protein 2 (CspZ) as a Serological Marker of Human Lyme Disease
Clin Vaccine Immunol. 2008 Mar 01; 15(3): 484-91.[more]
Nelson, M. I., Viboud, C., et al.
Multiple Reassortment Events In the Evolutionary History of H1N1 Influenza A Virus Since 1918
PLoS Pathog. 2008 Feb 15; 4(2): e1000012.[more]
Fedorova, N.D., Nierman, W.C., et al.
A Comparative View of the Genome of Aspergillus fumigatus
The Aspergilli Genomics, Medical Aspects, Biotechnology, and Research Methods. 2008 Feb 01;: 25-42.[more]
Djikeng, A., Halpin, R. A., et al.
Viral Genome Sequencing by Random Priming Methods
BMC Genomics. 2008 Jan 07; 9(1): 5.[more]
Boyd, E. F., Cohen, A. L., et al.
Molecular Analysis of the Emergence of Pandemic Vibrio parahaemolyticus
BMC Microbiol. 2008 Jan 01; 8: 110.[more]
Bao, Y., Bolotov, P., et al.
The Influenza Virus Resource at the National Center for Biotechnology Information
J Virol. 2008 Jan 01; 82(2): 596-601.[more]
Patron, N. J., Waller, R. F., et al.
Origin and Distribution of Epipolythiodioxopiperazine (ETP) Gene Clusters In Filamentous Ascomycetes
BMC Evol Biol. 2007 Sep 26; 7(1): 174.[more]
Nelson, M. I., Simonsen, L., et al.
Phylogenetic Analysis Reveals the Global Migration of Seasonal Influenza A Viruses
PLoS Pathog. 2007 Sep 14; 3(9): 1220-8.[more]
Eppinger, M., Rosovitz, M. J., et al.
The Complete Genome Sequence of Yersinia pseudotuberculosis IP31758, the Causative Agent of Far East Scarlet-like Fever
PLoS Genet. 2007 Aug 31; 3(8): e142.[more]
Auerbach, R. K., Tuanyok, A., et al.
Yersinia pestis Evolution on a Small Timescale: Comparison of Whole Genome Sequences from North America
PLoS ONE. 2007 Aug 22; 2(1): e770.[more]
Zhang, X., Hasoksuz, M., et al.
Quasispecies of Bovine Enteric and Respiratory Coronaviruses Based on Complete Genome Sequences and Genetic Changes After Tissue Culture Adaptation
Virology. 2007 Jun 20; 363(1): 1-10.[more]
Allan, G., Williams, A., Rabinowicz, P., Chan, A., Ravel, J., Keim, P.
Worldwide Genotyping of Castor Bean Germplasm (Ricinus communis L.) Using AFLPs and SSRs
Genet Resour Crop Evol.. 2007 Jun 01; 55(3): 365-378.[more]
Nene, V., Wortman, J. R., et al.
Genome Sequence of Aedes Aegypti, a Major Arbovirus Vector
Science. 2007 May 17; 316: 1718-1723.[more]
Hasoksuz, M., Alekseev, K., et al.
Biologic, Antigenic, and Full-length Genomic Characterization of a Bovine-like Coronavirus Isolated from a Giraffe
J Virol. 2007 May 01; 81(10): 4981-90.[more]
Salzberg, S. L., Kingsford, C., et al.
Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses
Emerg Infect Dis. 2007 May 01; 13(5): 713-8.[more]
Tiyawisutsri, R., Holden, M. T., et al.
Burkholderia Hep_Hap Autotransporter (BuHA) Proteins Elicit a Strong Antibody Response During Experimental Glanders but Not Human Melioidosis
BMC Microbiol. 2007 Mar 15; 7(1): 19.[more]
Welch, T. J., Fricke, W. F., et al.
Multiple Antimicrobial Resistance In Plague: an Emerging Public Health Risk
PLoS One. 2007 Mar 01; 2(3): e309.[more]
Zhang, X., Hasoksuz, M., et al.
Complete Genomic Sequences, a Key Residue In the Spike Protein and Deletions In Nonstructural Protein 3b of US Strains of the Virulent and Attenuated Coronaviruses, Transmissible Gastroenteritis Virus and Porcine Respiratory Coronavirus
Virology. 2007 Feb 20; 358(2): 424-35.[more]
Carlton, J. M., Hirt, R. P., et al.
Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis
Science. 2007 Jan 12; 315(5809): 207-12.[more]
Rasko, D. A., Rosovitz, M. J., et al.
Complete Sequence Analysis of Novel Plasmids from Emetic and Periodontal Bacillus cereus Isolates Reveals a Common Evolutionary History Among the B. Cereus-group Plasmids, Including Bacillus anthracis PXO1
J Bacteriol. 2007 Jan 01; 189(1): 52-64.[more]
Rokas, A., Payne, G., et al.
What Can Comparative Genomics Tell Us About Species Concepts In the Genus Aspergillus?
Stud Mycol. 2007 Jan 01; 59: 11-7.[more]
Nelson, M. I., Simonsen, L., et al.
Stochastic Processes Are Key Determinants of Short-Term Evolution In Influenza A Virus
PLoS Pathog. 2006 Dec 01; 2(12): e125.[more]
Romero, C. M., Deshazer, D., et al.
Genome Sequence Alterations Detected Upon Passage of Burkholderia mallei ATCC 23344 In Culture and In Mammalian Hosts
BMC Genomics. 2006 Sep 05; 7(1): 228.[more]
Wortman, J. R., Fedorova, N., et al.
Whole Genome Comparison of the A. fumigatus Family
Med Mycol. 2006 Sep 01; 44: 3-7.[more]
Salzberg, S., Ghedin, E., et al.
Shared Data Are Key to Beating Threat from Flu
Nature. 2006 Mar 30; 440(7084): 605.[more]
Wolf, Y. I., Viboud, C., et al.
Long Intervals of Stasis Punctuated by Bursts of Positive Selection In the Seasonal Evolution of Influenza A Virus
Biol Direct. 2006 Feb 01; 1: 34.[more]
Seshadri, R., Samuel, J.
Genome Analysis of Coxiella burnetii Species: Insights Into Pathogenesis and Evolution and Implications for Biodefense
Ann N Y Acad Sci. 2005 Dec 01; 1063: 442-50.[more]
Ghedin, E., Sengamalay, N. A., et al.
Large-scale Sequencing of Human Influenza Reveals the Dynamic Nature of Viral Genome Evolution
Nature. 2005 Oct 05; 437(7062): 1162-6.[more]
Lal, K., Field, M. C., et al.
Identification of a Very Large Rab GTPase Family In the Parasitic Protozoan Trichomonas vaginalis
Mol Biochem Parasitol. 2005 Oct 01; 143(2): 226-35.[more]
Hall, N., Carlton, J.
Comparative Genomics of Malaria Parasites
Curr Opin Genet Dev. 2005 Sep 20; 15(6): 609-13.[more]
Loftus, B. J., Hall, N.
Entamoeba: Still More to Be Learned from the Genome
Trends Parasitol. 2005 Aug 11; 21(10): 453.[more]
Cui, L., Fan, Q., et al.
Gene Discovery In Plasmodium vivax Through Sequencing of ESTs from Mixed Blood Stages
Mol Biochem Parasitol. 2005 Aug 04; 144(1): 1-9.[more]
Holmes, E. C., Ghedin, E., et al.
Whole-Genome Analysis of Human Influenza A Virus Reveals Multiple Persistent Lineages and Reassortment Among Recent H3N2 Viruses
PLoS Biol. 2005 Jul 26; 3(9): e300.[more]
Wang, R., Arevalo-Herrera, M., et al.
Immune Responses to Plasmodium vivax Pre-erythrocytic Stage Antigens In Naturally Exposed Duffy-negative Humans: a Potential Model for Identification of Liver-stage Antigens
Eur J Immunol. 2005 May 02; 35(6): 1859-1868.[more]
Vanacova, S., Yan, W., et al.
Spliceosomal Introns In the Deep-branching Eukaryote Trichomonas vaginalis
Proc Natl Acad Sci U S A. 2005 Mar 22; 102(12): 4430-5.[more]
Loftus, B., Anderson, I., et al.
The Genome of the Protist Parasite Entamoeba histolytica
Nature. 2005 Feb 24; 433(7028): 865-8.[more]
Silva, J. C., Bastida, F., et al.
A Potentially Functional Mariner Transposable Element In the Protist Trichomonas vaginalis
Mol Biol Evol. 2005 Jan 01; 22(1): 126-34.[more]
Carlton, J., Silva, J., et al.
The Genome of Model Malaria Parasites, and Comparative Genomics
Curr Issues Mol Biol. 2005 Jan 01; 7(1): 23-37.[more]
Lyons, E. J., Carlton, J. M.
Mind the Gap: Bridging the Divide Between Clinical and Molecular Studies of the Trichomonads
Trends Parasitol. 2004 May 01; 20(5): 204-7.[more]
Carlton, J.
The Plasmodium vivax Genome Sequencing Project
Trends Parasitol. 2003 May 01; 19(5): 227-31.[more]
Jun 19, 2012
JCVI Viral Finishing Pipeline: a Winning Combination of Advanced Sequencing Technologies, Software Development and Automated Data Processing
JCVI viral projects are supported by the NIAID Gen ...
Dec 21, 2011
Scientist Spotlight: Meet David Wentworth
During the height of the H1N1 Flu pandemic, David ...
Sep 30, 2011
Sequencing of high yield influenza reassortants at JCVI
As part of the Influenza Genome Sequencing Project ...
Apr 04, 2011
Insights gained from influenza genomic sequence data: viral diversity within human populations
The advent of large amounts of influenza genomic s ...
Dec 21, 2010
Insights gained from influenza genomic sequence data: frequent intrasubtype reassortment
Studies using whole genomic influenza sequence dat ...
IN THE NEWS
November 16, 2011
NIH Grantees Rebut Theory that Seasonal Flu Strains Originate in Tropical Regions
July 26, 2010
Tropical Medicine and Hygiene News: GSCID accepting applications
April 29, 2010
IDSA works with Federal Partners to Address Antibiotic Resistance
April 22, 2010
Microbe World: GSCID funded by NIAID are accepting applications for sequencing projects
June 9, 2009
New Sequencing Technologies Reshape NIAID's Sequencing Centers; Contracts Total $106M
May 29, 2009
GenomeWeb: JCVI Reels in $43M NIAID Contract


