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Avian H5N1 primers [Excel]

Citation:

Salzberg SL, Kingsford C, Cattoli G, Spiro DJ, Janies DA, Aly MM, Brown IH, Couacy-Hymann E, Mario De Mia G, Dung DH, Guercio A, Joannis T, Ali AS, Osmani IP, Saad MD, Savic V, Sengamalay N, Yingst S, Zaborsky J, Zorman-Rojs O, Ghedin E, Capua I. (2007) Genome analysis linking recent European and African influenza (H5N1) viruses. Emerg Infect Dis [serial on the Internet] 13(5). [Link]

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Avian T19 internal segments and NA primers [Excel]

Citation:

Dugan VG, Chen R, Spiro DJ, Sengamalay N, Zaborsky J, Ghedin E, Nolting J, Swayne DE, Runstadler JA, Happ GM, Senne DA, Wang R, Slemons RD, Holmes EC, Taubenberger JK. (2008) The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathogens 4(5):e1000076. [PubMed]

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Avian T20 HA segment primers [Excel]

Citation:

Dugan VG, Chen R, Spiro DJ, Sengamalay N, Zaborsky J, Ghedin E, Nolting J, Swayne DE, Runstadler JA, Happ GM, Senne DA, Wang R, Slemons RD, Holmes EC, Taubenberger JK. (2008) The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathogens 4(5):e1000076. [PubMed]

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Human H1N1 primers [Excel]

Citation:

Ghedin E, Sengamalay NA, Shumway M, Zaborsky J, Feldblyum T, Subbu V, Spiro DJ, Sitz J, Koo H, Bolotov P, Dernovoy D, Tatusova T, Bao Y, St George K, Taylor J, Lipman DJ, Fraser CM, Taubenberger JK, Salzberg SL. (2005) Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution. Nature 437(7062):1162-1166. [PubMed]

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Human H3N2 primers [Excel]

Citation:

Ghedin E, Sengamalay NA, Shumway M, Zaborsky J, Feldblyum T, Subbu V, Spiro DJ, Sitz J, Koo H, Bolotov P, Dernovoy D, Tatusova T, Bao Y, St George K, Taylor J, Lipman DJ, Fraser CM, Taubenberger JK, Salzberg SL. (2005) Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution. Nature 437(7062):1162-1166. [PubMed]

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Swine H1N1 primers [Excel]

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Avian H3N2 primers [Excel]

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Avian H3N8 primers [Excel]

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Avian H4N6 primers [Excel]

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Avian H5N2 primers [Excel]

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Avian H7N3 primers [Excel]

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Equine H7N7 primers [Excel]